How to efficiently find index of matrix elements in another matrix

Hello,

I have a matrix A of size 350000X1 and i want to find index of A in matrix B of size 900000 X 1. I used "Intersect" as below and it takes ~5 mins to get the result. Is there an efficient way to achieve this any faster?

[x,y,z] = intersect(A,B);

thanks,
Manoj kandukuri

Find more posts tagged with

Compose

English

Accepted answers

All comments

Roberta Varela_20843

@Manoj Kandukuri,

Are you willing to store only x results or do you also need y and z? Because in case you need only x, this solution is much faster:

x3 = unique(A(ismember(A,B)))

As a comparison, if you run these commands, which I created to replicate your scenario:

It is around 4 times faster with the second approach:

Elapsed time is 5.662 seconds.

Elapsed time is 1.344 seconds.

Regards,

Roberta

manoj kandukuri

Thank you Roberta,

I need "y" & "z" (which consists of index of each element of A in matrix . I need to parse these index to readcae command as requests.

thanks,

manoj kandukuri

Roberta Varela_20843

@Manoj Kandukuri,

What about adding these 2 commands after what I already suggested?

[bool,y2] = ismember(x2,A);
[bool,z2] = ismember(x2,B);

Results are the same (y is the original approach you shared and y2 is the new one):

It is still more than 2 times faster:

Elapsed time is 8.715 seconds.

Elapsed time is 3.456 seconds.

Regards,

Roberta

Roberta Varela_20843

PS: I wrote x2 in my latest commands, but I guess it should have been x3, to be aligned with my previous comment!

Roberta